Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930324.1_cds_XP_016477383.1_69121
CDS Infomation

[gene=LOC107798869] [db_xref=GeneID:107798869] [protein=1-aminocyclopropane-1-carboxylate oxidase homolog 1-like] [protein_id=XP_016477383.1] [location=complement(join(183243..183488,183565..183886,184570..185180))] [gbkey=CDS]
Sequence

ATGAGCAGCCTGTTGACCTTAACTAACTTATCTGTTAAGAAAAGTTTAGTTTTCTTTAAA
CTAAGAACAATTATGTCCTGCGCTGAAGAATTTCAAGCTGAATTGACAATGGATTATGAT
AGATCTAAGGAGATAAAGGCTTTTGATGATACAAAAGCTGGTGTTAAAGGACTAGTTGAT
TCTGGAATTTTGAACATACCAAGAATGTTCATTAGGCCAACTCAAGAACTTGTTGAAGAG
TTGAATCAGTGTAAGTCAACTCTAAAGATTCCAGTGGTAGATCTCAGTGGCATAGAAGTT
GAAGATCGACGTAAGAAGATTGTTGATGAAATAAGAGAAGCATCAGAAAAATGGGGATTT
TTCCAACTGATAAATCATGGTGTTCCTTCAAGTGTTTTGGAAGGAATGATTGATGGGATT
CGTAAATTTCATGAACAAGATGTTGAGTTAAAGAAAGAGTACTATTCGCGTGATCGAATA
ACAAGAAGAGTTAGATATGAGAGCAATTTTGATTTGTATCAATCAAAGACTGCAAACTGG
AGGGATACGTTGAACTTTTCAAGGCTAGTTTGTGGTCACATTGAACCTGAACAAATACCA
GCAATTTGCAGGAAAACATCTCTTGAGTACATAAATCATGTCATAAAACTAGGGGAAACT
CTTTTTGACTTACTGTCAGAAGCTCTTGGGCTAAAACCAGACCACTTGAAAGCCATGGAA
TGTGCCAATGGACAAGCATTGGCATGTCATTACTACCCAACATGCCCACAACCAGAGCTA
ACTCTTGGCGCCGATAAGCATACAGATCCTGCTTTCCTCACCATTCTGCTTCAAGATCAA
AGTGGTGGCTTTCAAGTCATGCATAATAACCAATGGGTTGATGTTGAACCGATTGAACGA
GGTTTGGTTGTTAATATTGGTGACCTTCTTCAGATACTATCAAATGACAAGTTTATAAGT
GTGAATCATAGAGTTGTAGCGAATGAGGTAGGACCAAGAATGTCAGTGGCATGCTTCTTC
ACTGGTGTTTTTGAACCTGCAAAGATGTATGGCCCAGTCAAAGAGCTCATATCAGAAGAA
AATCCCCCTCTTTATACAGAATTTACAGTAAGCGATTACATCAGTAAGTTTTTCTCGAGA
CCACTTGATACGTCTGGTCTTGACCTGTTCAGACTCTAA

Peptide Sequence

PEP ID

XP_016477383.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Nicotiana tabacum]
Sequence

MSSLLTLTNLSVKKSLVFFKLRTIMSCAEEFQAELTMDYDRSKEIKAFDDTKAGVKGLVD
SGILNIPRMFIRPTQELVEELNQCKSTLKIPVVDLSGIEVEDRRKKIVDEIREASEKWGF
FQLINHGVPSSVLEGMIDGIRKFHEQDVELKKEYYSRDRITRRVRYESNFDLYQSKTANW
RDTLNFSRLVCGHIEPEQIPAICRKTSLEYINHVIKLGETLFDLLSEALGLKPDHLKAME
CANGQALACHYYPTCPQPELTLGADKHTDPAFLTILLQDQSGGFQVMHNNQWVDVEPIER
GLVVNIGDLLQILSNDKFISVNHRVVANEVGPRMSVACFFTGVFEPAKMYGPVKELISEE
NPPLYTEFTVSDYISKFFSRPLDTSGLDLFRL

Transcript Sequence

Gene sequence data has not been registered.